WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45E1.7a.2 Sequence Name  F45E1.7a.2
Length (nt)  1734   Chromosome Location  X: 7988932-7992809
Chromosome . Primary Identifier  X Chromosome Location . Start  7988932
Chromosome Location . End  7992809 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45E1.7a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018467 sdpn-1 F45E1.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45E1.7a F45E1.7a 1470   X: 7989195-7989245

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F45E1.7a.2 7988932 7992809 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon241217   314   X: 7988932-7989245 Caenorhabditis elegans
Exon241220   339   X: 7989294-7989632 Caenorhabditis elegans
Exon241223   186   X: 7989684-7989869 Caenorhabditis elegans
Exon241226   130   X: 7989939-7990068 Caenorhabditis elegans
Exon241229   132   X: 7990113-7990244 Caenorhabditis elegans
Exon241232   125   X: 7990463-7990587 Caenorhabditis elegans
Exon241235   111   X: 7991463-7991573 Caenorhabditis elegans
Exon241238   99   X: 7992208-7992306 Caenorhabditis elegans
Exon241241   225   X: 7992358-7992582 Caenorhabditis elegans
Exon241244   73   X: 7992737-7992809 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F45E1.7a.2 7988932 7992809 -1

1 Sequence

Length
1734

1 Sequence Ontology Term

Identifier Name Description
transcript