WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C39D10.3a.1 Sequence Name  C39D10.3a.1
Length (nt)  1230   Chromosome Location  X: 7884325-7887479
Chromosome . Primary Identifier  X Chromosome Location . Start  7884325
Chromosome Location . End  7887479 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C39D10.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016531 pcyt-2.2 C39D10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C39D10.3a C39D10.3a 1086   X: 7884369-7884442

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C39D10.3a.1 7884325 7887479 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon240967   118   X: 7884325-7884442 Caenorhabditis elegans
Exon240968   94   X: 7884496-7884589 Caenorhabditis elegans
Exon240969   81   X: 7884682-7884762 Caenorhabditis elegans
Exon240970   76   X: 7884809-7884884 Caenorhabditis elegans
Exon240971   101   X: 7884958-7885058 Caenorhabditis elegans
Exon240972   96   X: 7885397-7885492 Caenorhabditis elegans
Exon240974   102   X: 7885536-7885637 Caenorhabditis elegans
Exon240976   111   X: 7886450-7886560 Caenorhabditis elegans
Exon240978   78   X: 7886610-7886687 Caenorhabditis elegans
Exon240980   72   X: 7886737-7886808 Caenorhabditis elegans
Exon240982   131   X: 7887122-7887252 Caenorhabditis elegans
Exon240985   170   X: 7887310-7887479 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C39D10.3a.1 7884325 7887479 1

1 Sequence

Length
1230

1 Sequence Ontology Term

Identifier Name Description
transcript