WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54D2.1a.1 Sequence Name  C54D2.1a.1
Length (nt)  1377   Chromosome Location  X: 7842541-7845557
Chromosome . Primary Identifier  X Chromosome Location . Start  7842541
Chromosome Location . End  7845557 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54D2.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016915 idpp-11 C54D2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54D2.1a C54D2.1a 1167   X: 7842632-7842722

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54D2.1a.1 7842541 7845557 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon240705   182   X: 7842541-7842722 Caenorhabditis elegans
Exon240707   168   X: 7843606-7843773 Caenorhabditis elegans
Exon240709   132   X: 7843825-7843956 Caenorhabditis elegans
Exon240711   103   X: 7844195-7844297 Caenorhabditis elegans
Exon240714   88   X: 7844449-7844536 Caenorhabditis elegans
Exon240716   237   X: 7844589-7844825 Caenorhabditis elegans
Exon240719   222   X: 7845046-7845267 Caenorhabditis elegans
Exon240721   245   X: 7845313-7845557 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54D2.1a.1 7842541 7845557 1

1 Sequence

Length
1377

1 Sequence Ontology Term

Identifier Name Description
transcript