WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C47C12.6f Sequence Name  C47C12.6f
Length (nt)  2283   Chromosome Location  X: 7763219-7763563
Chromosome . Primary Identifier  X Chromosome Location . Start  7763219
Chromosome Location . End  7763563
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47C12.6f

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53220 DEG-1, isoform f 86.3 760 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00042661
WBRNAi00012061
WBRNAi00012066

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:C47C12.6f 7763219 7763563 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000950 deg-1 C47C12.6 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier 		Start End Strand
CDS:C47C12.6f 7763219 7763563 1
CDS:C47C12.6f 7763608 7763706 1
CDS:C47C12.6f 7763833 7764045 1
CDS:C47C12.6f 7764110 7764208 1
CDS:C47C12.6f 7764251 7764315 1
CDS:C47C12.6f 7765183 7765318 1
CDS:C47C12.6f 7765642 7765759 1
CDS:C47C12.6f 7766540 7766601 1
CDS:C47C12.6f 7766646 7766803 1
CDS:C47C12.6f 7766852 7767113 1
CDS:C47C12.6f 7767164 7767380 1
CDS:C47C12.6f 7767426 7767574 1
CDS:C47C12.6f 7767979 7768050 1
CDS:C47C12.6f 7774342 7774444 1
CDS:C47C12.6f 7774491 7774675 1

1 Sequence

Length
2283

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C47C12.6f.1 C47C12.6f.1 2283   X: 7763219-7774675