WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C47C12.6a.1 Sequence Name  C47C12.6a.1
Length (nt)  2489   Chromosome Location  X: 7763209-7774817
Chromosome . Primary Identifier  X Chromosome Location . Start  7763209
Chromosome Location . End  7774817 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47C12.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000950 deg-1 C47C12.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C47C12.6a C47C12.6a 2337   X: 7763219-7763563

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C47C12.6a.1 7763209 7774817 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon240436   355   X: 7763209-7763563 Caenorhabditis elegans
Exon240443   99   X: 7763608-7763706 Caenorhabditis elegans
Exon240451   213   X: 7763833-7764045 Caenorhabditis elegans
Exon240459   99   X: 7764110-7764208 Caenorhabditis elegans
Exon240467   65   X: 7764251-7764315 Caenorhabditis elegans
Exon240475   136   X: 7765183-7765318 Caenorhabditis elegans
Exon240486   118   X: 7765642-7765759 Caenorhabditis elegans
Exon240494   54   X: 7765947-7766000 Caenorhabditis elegans
Exon240502   62   X: 7766540-7766601 Caenorhabditis elegans
Exon240510   158   X: 7766646-7766803 Caenorhabditis elegans
Exon240518   262   X: 7766852-7767113 Caenorhabditis elegans
Exon240526   217   X: 7767164-7767380 Caenorhabditis elegans
Exon240534   149   X: 7767426-7767574 Caenorhabditis elegans
Exon240542   72   X: 7767979-7768050 Caenorhabditis elegans
Exon240554   103   X: 7774342-7774444 Caenorhabditis elegans
Exon240569   327   X: 7774491-7774817 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C47C12.6a.1 7763209 7774817 1

1 Sequence

Length
2489

1 Sequence Ontology Term

Identifier Name Description
transcript