WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C53C9.3a.1 Sequence Name  C53C9.3a.1
Length (nt)  1904   Chromosome Location  X: 7690543-7707127
Chromosome . Primary Identifier  X Chromosome Location . Start  7690543
Chromosome Location . End  7707127 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53C9.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002242 kvs-1 C53C9.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C53C9.3a C53C9.3a 1473   X: 7690933-7690990

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C53C9.3a.1 7690543 7707127 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon240301   448   X: 7690543-7690990 Caenorhabditis elegans
Exon240305   100   X: 7691736-7691835 Caenorhabditis elegans
Exon240309   230   X: 7691888-7692117 Caenorhabditis elegans
Exon240313   183   X: 7692777-7692959 Caenorhabditis elegans
Exon240317   115   X: 7693008-7693122 Caenorhabditis elegans
Exon240322   55   X: 7693678-7693732 Caenorhabditis elegans
Exon240326   153   X: 7694281-7694433 Caenorhabditis elegans
Exon240330   43   X: 7694523-7694565 Caenorhabditis elegans
Exon240334   182   X: 7694944-7695125 Caenorhabditis elegans
Exon240338   222   X: 7696007-7696228 Caenorhabditis elegans
Exon240342   91   X: 7696431-7696521 Caenorhabditis elegans
Exon240350   82   X: 7707046-7707127 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C53C9.3a.1 7690543 7707127 -1

1 Sequence

Length
1904

1 Sequence Ontology Term

Identifier Name Description
transcript