WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F27D9.5.1 Sequence Name  F27D9.5.1
Length (nt)  2476   Chromosome Location  X: 7657512-7660986
Chromosome . Primary Identifier  X Chromosome Location . Start  7657512
Chromosome Location . End  7660986 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F27D9.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017864 pcca-1 F27D9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F27D9.5 F27D9.5 2175   X: 7657805-7657963

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F27D9.5.1 7657512 7660986 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon240216   452   X: 7657512-7657963 Caenorhabditis elegans
Exon240217   705   X: 7658018-7658722 Caenorhabditis elegans
Exon240218   288   X: 7658778-7659065 Caenorhabditis elegans
Exon240219   651   X: 7659113-7659763 Caenorhabditis elegans
Exon240220   200   X: 7660505-7660704 Caenorhabditis elegans
Exon240221   95   X: 7660755-7660849 Caenorhabditis elegans
Exon240222   85   X: 7660902-7660986 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F27D9.5.1 7657512 7660986 -1

1 Sequence

Length
2476

1 Sequence Ontology Term

Identifier Name Description
transcript