WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08C6.3.1 Sequence Name  F08C6.3.1
Length (nt)  2267   Chromosome Location  X: 7565323-7568145
Chromosome . Primary Identifier  X Chromosome Location . Start  7565323
Chromosome Location . End  7568145 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08C6.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007059 vps-52 F08C6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08C6.3 F08C6.3 2109   X: 7565331-7565487

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F08C6.3.1 7565323 7568145 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239990   165   X: 7565323-7565487 Caenorhabditis elegans
Exon239991   119   X: 7565530-7565648 Caenorhabditis elegans
Exon239992   96   X: 7565711-7565806 Caenorhabditis elegans
Exon239993   231   X: 7565849-7566079 Caenorhabditis elegans
Exon239994   234   X: 7566134-7566367 Caenorhabditis elegans
Exon239995   207   X: 7566418-7566624 Caenorhabditis elegans
Exon239996   126   X: 7566675-7566800 Caenorhabditis elegans
Exon239997   282   X: 7566910-7567191 Caenorhabditis elegans
Exon239998   391   X: 7567240-7567630 Caenorhabditis elegans
Exon239999   119   X: 7567678-7567796 Caenorhabditis elegans
Exon240000   297   X: 7567849-7568145 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F08C6.3.1 7565323 7568145 1

1 Sequence

Length
2267

1 Sequence Ontology Term

Identifier Name Description
transcript