WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48E3.8f.1 Sequence Name  F48E3.8f.1
Length (nt)  6434   Chromosome Location  X: 7509349-7517782
Chromosome . Primary Identifier  X Chromosome Location . Start  7509349
Chromosome Location . End  7517782 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48E3.8f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018607 chts-1 F48E3.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48E3.8f F48E3.8f 6336   X: 7509447-7509553

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F48E3.8f.1 7509349 7517782 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

35 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239711   205   X: 7509349-7509553 Caenorhabditis elegans
Exon239713   132   X: 7509599-7509730 Caenorhabditis elegans
Exon239714   145   X: 7509785-7509929 Caenorhabditis elegans
Exon239715   172   X: 7509976-7510147 Caenorhabditis elegans
Exon239716   274   X: 7510197-7510470 Caenorhabditis elegans
Exon239717   138   X: 7510517-7510654 Caenorhabditis elegans
Exon239718   189   X: 7510698-7510886 Caenorhabditis elegans
Exon239719   130   X: 7510935-7511064 Caenorhabditis elegans
Exon239720   138   X: 7511115-7511252 Caenorhabditis elegans
Exon239721   276   X: 7511299-7511574 Caenorhabditis elegans
Exon239722   329   X: 7511627-7511955 Caenorhabditis elegans
Exon239723   84   X: 7512105-7512188 Caenorhabditis elegans
Exon239724   324   X: 7512242-7512565 Caenorhabditis elegans
Exon239725   186   X: 7512611-7512796 Caenorhabditis elegans
Exon239730   126   X: 7512895-7513020 Caenorhabditis elegans
Exon239738   120   X: 7513068-7513187 Caenorhabditis elegans
Exon239744   129   X: 7513231-7513359 Caenorhabditis elegans
Exon239750   396   X: 7513408-7513803 Caenorhabditis elegans
Exon239756   309   X: 7513852-7514160 Caenorhabditis elegans
Exon239764   165   X: 7514249-7514413 Caenorhabditis elegans
Exon239772   249   X: 7514486-7514734 Caenorhabditis elegans
Exon239780   252   X: 7514933-7515184 Caenorhabditis elegans
Exon239788   151   X: 7515240-7515390 Caenorhabditis elegans
Exon239796   371   X: 7515438-7515808 Caenorhabditis elegans
Exon239804   129   X: 7515855-7515983 Caenorhabditis elegans
Exon239810   123   X: 7516031-7516153 Caenorhabditis elegans
Exon239817   132   X: 7516203-7516334 Caenorhabditis elegans
Exon239825   165   X: 7516387-7516551 Caenorhabditis elegans
Exon239833   177   X: 7516606-7516782 Caenorhabditis elegans
Exon239841   186   X: 7516828-7517013 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F48E3.8f.1 7509349 7517782 -1

1 Sequence

Length
6434

1 Sequence Ontology Term

Identifier Name Description
transcript