WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48E3.8g.1 Sequence Name  F48E3.8g.1
Length (nt)  5337   Chromosome Location  X: 7508011-7519669
Chromosome . Primary Identifier  X Chromosome Location . Start  7508011
Chromosome Location . End  7519669 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48E3.8g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018607 chts-1 F48E3.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48E3.8g F48E3.8g 5337   X: 7508011-7508109

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F48E3.8g.1 7508011 7519669 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239677   99   X: 7508011-7508109 Caenorhabditis elegans
Exon239683   144   X: 7508156-7508299 Caenorhabditis elegans
Exon239691   383   X: 7508350-7508732 Caenorhabditis elegans
Exon239699   383   X: 7508789-7509171 Caenorhabditis elegans
Exon239707   88   X: 7509218-7509305 Caenorhabditis elegans
Exon239731   126   X: 7512895-7513020 Caenorhabditis elegans
Exon239739   120   X: 7513068-7513187 Caenorhabditis elegans
Exon239745   129   X: 7513231-7513359 Caenorhabditis elegans
Exon239751   396   X: 7513408-7513803 Caenorhabditis elegans
Exon239757   309   X: 7513852-7514160 Caenorhabditis elegans
Exon239765   165   X: 7514249-7514413 Caenorhabditis elegans
Exon239773   249   X: 7514486-7514734 Caenorhabditis elegans
Exon239781   252   X: 7514933-7515184 Caenorhabditis elegans
Exon239789   151   X: 7515240-7515390 Caenorhabditis elegans
Exon239797   371   X: 7515438-7515808 Caenorhabditis elegans
Exon239805   129   X: 7515855-7515983 Caenorhabditis elegans
Exon239811   123   X: 7516031-7516153 Caenorhabditis elegans
Exon239818   132   X: 7516203-7516334 Caenorhabditis elegans
Exon239826   165   X: 7516387-7516551 Caenorhabditis elegans
Exon239834   177   X: 7516606-7516782 Caenorhabditis elegans
Exon239842   186   X: 7516828-7517013 Caenorhabditis elegans
Exon239850   113   X: 7517064-7517176 Caenorhabditis elegans
Exon239858   79   X: 7517220-7517298 Caenorhabditis elegans
Exon239866   69   X: 7517348-7517416 Caenorhabditis elegans
Exon239874   237   X: 7517463-7517699 Caenorhabditis elegans
Exon239882   171   X: 7517989-7518159 Caenorhabditis elegans
Exon239886   126   X: 7518988-7519113 Caenorhabditis elegans
Exon239892   174   X: 7519281-7519454 Caenorhabditis elegans
Exon239893   91   X: 7519579-7519669 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F48E3.8g.1 7508011 7519669 -1

1 Sequence

Length
5337

1 Sequence Ontology Term

Identifier Name Description
transcript