WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48E3.8a.1 Sequence Name  F48E3.8a.1
Length (nt)  4943   Chromosome Location  X: 7507877-7517782
Chromosome . Primary Identifier  X Chromosome Location . Start  7507877
Chromosome Location . End  7517782 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48E3.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018607 chts-1 F48E3.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48E3.8a F48E3.8a 4809   X: 7508011-7508109

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F48E3.8a.1 7507877 7517782 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

26 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239670   233   X: 7507877-7508109 Caenorhabditis elegans
Exon239678   144   X: 7508156-7508299 Caenorhabditis elegans
Exon239686   383   X: 7508350-7508732 Caenorhabditis elegans
Exon239694   383   X: 7508789-7509171 Caenorhabditis elegans
Exon239703   88   X: 7509218-7509305 Caenorhabditis elegans
Exon239726   126   X: 7512895-7513020 Caenorhabditis elegans
Exon239734   120   X: 7513068-7513187 Caenorhabditis elegans
Exon239742   129   X: 7513231-7513359 Caenorhabditis elegans
Exon239748   396   X: 7513408-7513803 Caenorhabditis elegans
Exon239754   309   X: 7513852-7514160 Caenorhabditis elegans
Exon239760   165   X: 7514249-7514413 Caenorhabditis elegans
Exon239768   249   X: 7514486-7514734 Caenorhabditis elegans
Exon239776   252   X: 7514933-7515184 Caenorhabditis elegans
Exon239784   151   X: 7515240-7515390 Caenorhabditis elegans
Exon239792   371   X: 7515438-7515808 Caenorhabditis elegans
Exon239800   129   X: 7515855-7515983 Caenorhabditis elegans
Exon239808   123   X: 7516031-7516153 Caenorhabditis elegans
Exon239813   132   X: 7516203-7516334 Caenorhabditis elegans
Exon239821   165   X: 7516387-7516551 Caenorhabditis elegans
Exon239829   177   X: 7516606-7516782 Caenorhabditis elegans
Exon239837   186   X: 7516828-7517013 Caenorhabditis elegans
Exon239845   113   X: 7517064-7517176 Caenorhabditis elegans
Exon239853   79   X: 7517220-7517298 Caenorhabditis elegans
Exon239861   69   X: 7517348-7517416 Caenorhabditis elegans
Exon239869   237   X: 7517463-7517699 Caenorhabditis elegans
Exon239877   34   X: 7517749-7517782 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F48E3.8a.1 7507877 7517782 -1

1 Sequence

Length
4943

1 Sequence Ontology Term

Identifier Name Description
transcript