WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F48E3.9.1 Sequence Name  F48E3.9.1
Length (nt)  2426   Chromosome Location  X: 7481056-7485213
Chromosome . Primary Identifier  X Chromosome Location . Start  7481056
Chromosome Location . End  7485213 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F48E3.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018608 F48E3.9 F48E3.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F48E3.9 F48E3.9 1836   X: 7481471-7481489

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F48E3.9.1 7481056 7485213 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239570   434   X: 7481056-7481489 Caenorhabditis elegans
Exon239571   85   X: 7481539-7481623 Caenorhabditis elegans
Exon239572   105   X: 7481682-7481786 Caenorhabditis elegans
Exon239573   205   X: 7481829-7482033 Caenorhabditis elegans
Exon239574   108   X: 7482078-7482185 Caenorhabditis elegans
Exon239575   83   X: 7483056-7483138 Caenorhabditis elegans
Exon239576   76   X: 7483185-7483260 Caenorhabditis elegans
Exon239577   124   X: 7483307-7483430 Caenorhabditis elegans
Exon239578   179   X: 7483484-7483662 Caenorhabditis elegans
Exon239579   147   X: 7483720-7483866 Caenorhabditis elegans
Exon239580   78   X: 7484190-7484267 Caenorhabditis elegans
Exon239581   234   X: 7484317-7484550 Caenorhabditis elegans
Exon239582   168   X: 7484596-7484763 Caenorhabditis elegans
Exon239583   400   X: 7484814-7485213 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F48E3.9.1 7481056 7485213 1

1 Sequence

Length
2426

1 Sequence Ontology Term

Identifier Name Description
transcript