WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08A8.2a.1 Sequence Name  K08A8.2a.1
Length (nt)  1625   Chromosome Location  X: 7458282-7460548
Chromosome . Primary Identifier  X Chromosome Location . Start  7458282
Chromosome Location . End  7460548 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08A8.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004949 sox-2 K08A8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08A8.2a K08A8.2a 852   X: 7459017-7459397

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K08A8.2a.1 7458282 7460548 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon239504   1116   X: 7458282-7459397 Caenorhabditis elegans
Exon239507   105   X: 7459450-7459554 Caenorhabditis elegans
Exon239512   126   X: 7459626-7459751 Caenorhabditis elegans
Exon239517   64   X: 7460193-7460256 Caenorhabditis elegans
Exon239520   214   X: 7460335-7460548 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K08A8.2a.1 7458282 7460548 -1

1 Sequence

Length
1625

1 Sequence Ontology Term

Identifier Name Description
transcript