WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C56G3.1a Sequence Name  C56G3.1a
Length (nt)  1473   Chromosome Location  X: 7385960-7386055
Chromosome . Primary Identifier  X Chromosome Location . Start  7385960
Chromosome Location . End  7386055
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C56G3.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE04283 NPR-8, isoform a 56.2 490 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00043292
WBRNAi00072204
WBRNAi00012475
WBRNAi00030212

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:C56G3.1a 7385960 7386055 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016984 npr-8 C56G3.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier 		Start End Strand
CDS:C56G3.1a 7385960 7386055 1
CDS:C56G3.1a 7386106 7386300 1
CDS:C56G3.1a 7386359 7386510 1
CDS:C56G3.1a 7386852 7387002 1
CDS:C56G3.1a 7387100 7387582 1
CDS:C56G3.1a 7387689 7387900 1
CDS:C56G3.1a 7387948 7388034 1
CDS:C56G3.1a 7388110 7388206 1

1 Sequence

Length
1473

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C56G3.1a.1 C56G3.1a.1 1723   X: 7377302-7388379
Transcript:C56G3.1a.2 C56G3.1a.2 1682   X: 7385949-7388404