WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00201853 Gene Name  ZK867.22
Sequence Name  ? ZK867.22 Organism  Caenorhabditis elegans
Automated Description  Is affected by cep-1 based on RNA-seq studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 145
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00201853

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK867.22 ZK867.22 145   X: 7216469-7216613
 

Other

0 CDSs

0 RNAi Result

9 Allele

Public Name
gk964260
gk963778
gk963873
gk963874
gk964087
gk964003
gk964004
WBVar01469664
WBVar01469663

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00201853 7216469 7216613 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_7216614..7216686   73 X: 7216614-7216686 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  ncRNAs with significantly increased expression in cep-1(gk138) than in N2 under normal conditions, according to RNAseq. ncRNAs with more than 2 fold difference in expression are considered differentially expressed WBPaper00045380:cep-1(gk138)_upregulated_normal

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00201853 7216469 7216613 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
145

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_7215870..7216468   599 X: 7215870-7216468 Caenorhabditis elegans