WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00201587 Gene Name  ZK867.20
Sequence Name  ? ZK867.20 Organism  Caenorhabditis elegans
Automated Description  Is affected by daf-2 based on microarray studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 149
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00201587

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK867.20 ZK867.20 149   X: 7214688-7214836
 

Other

0 CDSs

0 RNAi Result

11 Allele

Public Name
gk964260
gk963778
gk963873
gk963874
gk964087
gk964003
gk964004
gk564297
gk546884
gk643057
WBVar01883109

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00201587 7214688 7214836 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_7214837..7214953   117 X: 7214837-7214953 Caenorhabditis elegans

2 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in daf-2(e1370) comparing to in N2. Student's t-test, fold change > 2, p-value < 0.05. WBPaper00055386:daf-2(e1370)_upregulated
Bacteria Diet: L. plantarum with pdxH mutant vs. L. plantarum Transcripts that showed significantly decreased expression in N2 animals fed with L. plantarum with pdxH mutant, comparing to in N2 animals fed with L. plantarum. GFold3, logFC < -1 or > 1. WBPaper00066703:L.plantarum-pdxH_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00201587 7214688 7214836 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
149

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_7213957..7214687   731 X: 7213957-7214687 Caenorhabditis elegans