WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00199524 Gene Name  C55B6.6
Sequence Name  ? C55B6.6 Organism  Caenorhabditis elegans
Automated Description  Is affected by ifo-1 based on microarray studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 123
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This Gene isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00199524

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C55B6.6 C55B6.6 123   X: 7200117-7200239
 

Other

0 CDSs

0 RNAi Result

7 Allele

Public Name
gk964260
gk963778
gk963873
gk963874
gk964003
gk757753
gk284642

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00199524 7200117 7200239 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_7198292..7200116   1825 X: 7198292-7200116 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly decreased expression in ifo-1(kc2) comparing to in N2 animals. ANOVA, p-value < 0.05. WBPaper00056167:ifo-1(kc2)_downregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00199524 7200117 7200239 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
123

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_7200240..7200363   124 X: 7200240-7200363 Caenorhabditis elegans