WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54D1.6.1 Sequence Name  C54D1.6.1
Length (nt)  2592   Chromosome Location  X: 7166005-7170625
Chromosome . Primary Identifier  X Chromosome Location . Start  7166005
Chromosome Location . End  7170625 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54D1.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000238 bar-1 C54D1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54D1.6 C54D1.6 2436   X: 7166152-7166387

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54D1.6.1 7166005 7170625 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon238727   383   X: 7166005-7166387 Caenorhabditis elegans
Exon238728   157   X: 7167038-7167194 Caenorhabditis elegans
Exon238729   89   X: 7167241-7167329 Caenorhabditis elegans
Exon238730   232   X: 7167374-7167605 Caenorhabditis elegans
Exon238731   96   X: 7167649-7167744 Caenorhabditis elegans
Exon238732   126   X: 7167791-7167916 Caenorhabditis elegans
Exon238733   144   X: 7167965-7168108 Caenorhabditis elegans
Exon238734   114   X: 7168152-7168265 Caenorhabditis elegans
Exon238735   246   X: 7168311-7168556 Caenorhabditis elegans
Exon238736   213   X: 7168604-7168816 Caenorhabditis elegans
Exon238737   115   X: 7168871-7168985 Caenorhabditis elegans
Exon238738   125   X: 7169034-7169158 Caenorhabditis elegans
Exon238739   147   X: 7169205-7169351 Caenorhabditis elegans
Exon238740   105   X: 7169985-7170089 Caenorhabditis elegans
Exon238741   96   X: 7170147-7170242 Caenorhabditis elegans
Exon238742   127   X: 7170308-7170434 Caenorhabditis elegans
Exon238743   77   X: 7170549-7170625 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54D1.6.1 7166005 7170625 -1

1 Sequence

Length
2592

1 Sequence Ontology Term

Identifier Name Description
transcript