WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54D1.1.1 Sequence Name  C54D1.1.1
Length (nt)  4284   Chromosome Location  X: 7159036-7166021
Chromosome . Primary Identifier  X Chromosome Location . Start  7159036
Chromosome Location . End  7166021 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54D1.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004004 pgp-10 C54D1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54D1.1 C54D1.1 4149   X: 7159036-7159204

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54D1.1.1 7159036 7166021 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon238698   169   X: 7159036-7159204 Caenorhabditis elegans
Exon238699   116   X: 7159764-7159879 Caenorhabditis elegans
Exon238700   102   X: 7159926-7160027 Caenorhabditis elegans
Exon238701   132   X: 7160074-7160205 Caenorhabditis elegans
Exon238702   134   X: 7160278-7160411 Caenorhabditis elegans
Exon238703   172   X: 7160751-7160922 Caenorhabditis elegans
Exon238704   125   X: 7160975-7161099 Caenorhabditis elegans
Exon238705   82   X: 7161148-7161229 Caenorhabditis elegans
Exon238706   87   X: 7161281-7161367 Caenorhabditis elegans
Exon238707   109   X: 7161410-7161518 Caenorhabditis elegans
Exon238708   105   X: 7161571-7161675 Caenorhabditis elegans
Exon238709   188   X: 7161726-7161913 Caenorhabditis elegans
Exon238710   141   X: 7161962-7162102 Caenorhabditis elegans
Exon238711   89   X: 7162153-7162241 Caenorhabditis elegans
Exon238712   295   X: 7162291-7162585 Caenorhabditis elegans
Exon238713   117   X: 7162877-7162993 Caenorhabditis elegans
Exon238714   210   X: 7163041-7163250 Caenorhabditis elegans
Exon238715   156   X: 7163309-7163464 Caenorhabditis elegans
Exon238716   102   X: 7163513-7163614 Caenorhabditis elegans
Exon238717   66   X: 7163677-7163742 Caenorhabditis elegans
Exon238718   260   X: 7163786-7164045 Caenorhabditis elegans
Exon238719   141   X: 7164091-7164231 Caenorhabditis elegans
Exon238720   141   X: 7164278-7164418 Caenorhabditis elegans
Exon238721   160   X: 7164470-7164629 Caenorhabditis elegans
Exon238722   90   X: 7164676-7164765 Caenorhabditis elegans
Exon238723   207   X: 7165025-7165231 Caenorhabditis elegans
Exon238724   105   X: 7165281-7165385 Caenorhabditis elegans
Exon238725   211   X: 7165427-7165637 Caenorhabditis elegans
Exon238726   272   X: 7165750-7166021 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54D1.1.1 7159036 7166021 1

1 Sequence

Length
4284

1 Sequence Ontology Term

Identifier Name Description
transcript