WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54D1.5.1 Sequence Name  C54D1.5.1
Length (nt)  6043   Chromosome Location  X: 7143846-7151239
Chromosome . Primary Identifier  X Chromosome Location . Start  7143846
Chromosome Location . End  7151239 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54D1.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016913 lam-2 C54D1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54D1.5 C54D1.5 4902   X: 7144934-7145017

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54D1.5.1 7143846 7151239 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon238680   1172   X: 7143846-7145017 Caenorhabditis elegans
Exon238681   182   X: 7145067-7145248 Caenorhabditis elegans
Exon238682   1326   X: 7145300-7146625 Caenorhabditis elegans
Exon238683   1511   X: 7146677-7148187 Caenorhabditis elegans
Exon238684   456   X: 7148238-7148693 Caenorhabditis elegans
Exon238685   122   X: 7148740-7148861 Caenorhabditis elegans
Exon238686   185   X: 7148908-7149092 Caenorhabditis elegans
Exon238687   179   X: 7149144-7149322 Caenorhabditis elegans
Exon238688   315   X: 7149375-7149689 Caenorhabditis elegans
Exon238689   118   X: 7149734-7149851 Caenorhabditis elegans
Exon238690   127   X: 7149899-7150025 Caenorhabditis elegans
Exon238691   350   X: 7150890-7151239 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54D1.5.1 7143846 7151239 -1

1 Sequence

Length
6043

1 Sequence Ontology Term

Identifier Name Description
transcript