WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54D1.4.1 Sequence Name  C54D1.4.1
Length (nt)  1654   Chromosome Location  X: 7140504-7143641
Chromosome . Primary Identifier  X Chromosome Location . Start  7140504
Chromosome Location . End  7143641 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54D1.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000116 alh-10 C54D1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54D1.4 C54D1.4 1521   X: 7140573-7140701

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54D1.4.1 7140504 7143641 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon238671   198   X: 7140504-7140701 Caenorhabditis elegans
Exon238672   129   X: 7141037-7141165 Caenorhabditis elegans
Exon238673   111   X: 7141212-7141322 Caenorhabditis elegans
Exon238674   156   X: 7141370-7141525 Caenorhabditis elegans
Exon238675   109   X: 7141566-7141674 Caenorhabditis elegans
Exon238676   347   X: 7141944-7142290 Caenorhabditis elegans
Exon238677   178   X: 7142334-7142511 Caenorhabditis elegans
Exon238678   129   X: 7142556-7142684 Caenorhabditis elegans
Exon238679   297   X: 7143345-7143641 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54D1.4.1 7140504 7143641 -1

1 Sequence

Length
1654

1 Sequence Ontology Term

Identifier Name Description
transcript