WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54D1.3e.1 Sequence Name  C54D1.3e.1
Length (nt)  3567   Chromosome Location  X: 7126651-7139270
Chromosome . Primary Identifier  X Chromosome Location . Start  7126651
Chromosome Location . End  7139270 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54D1.3e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002163 ist-1 C54D1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54D1.3e C54D1.3e 3567   X: 7126651-7126865

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54D1.3e.1 7126651 7139270 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon238598   215   X: 7126651-7126865 Caenorhabditis elegans
Exon238601   185   X: 7132152-7132336 Caenorhabditis elegans
Exon238607   233   X: 7132891-7133123 Caenorhabditis elegans
Exon238611   138   X: 7133536-7133673 Caenorhabditis elegans
Exon238615   175   X: 7133732-7133906 Caenorhabditis elegans
Exon238619   124   X: 7133949-7134072 Caenorhabditis elegans
Exon238623   118   X: 7134127-7134244 Caenorhabditis elegans
Exon238627   188   X: 7134302-7134489 Caenorhabditis elegans
Exon238631   12   X: 7134541-7134552 Caenorhabditis elegans
Exon238633   231   X: 7135249-7135479 Caenorhabditis elegans
Exon238635   54   X: 7135529-7135582 Caenorhabditis elegans
Exon238639   222   X: 7135779-7136000 Caenorhabditis elegans
Exon238643   139   X: 7136051-7136189 Caenorhabditis elegans
Exon238647   201   X: 7136240-7136440 Caenorhabditis elegans
Exon238651   245   X: 7136880-7137124 Caenorhabditis elegans
Exon238655   162   X: 7137174-7137335 Caenorhabditis elegans
Exon238659   482   X: 7137385-7137866 Caenorhabditis elegans
Exon238663   145   X: 7138777-7138921 Caenorhabditis elegans
Exon238666   298   X: 7138973-7139270 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54D1.3e.1 7126651 7139270 1

1 Sequence

Length
3567

1 Sequence Ontology Term

Identifier Name Description
transcript