WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54D1.3b.1 Sequence Name  C54D1.3b.1
Length (nt)  3681   Chromosome Location  X: 7126648-7139666
Chromosome . Primary Identifier  X Chromosome Location . Start  7126648
Chromosome Location . End  7139666 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54D1.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002163 ist-1 C54D1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54D1.3b C54D1.3b 3282   X: 7126651-7126865

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54D1.3b.1 7126648 7139666 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon238597   218   X: 7126648-7126865 Caenorhabditis elegans
Exon238600   185   X: 7132152-7132336 Caenorhabditis elegans
Exon238604   233   X: 7132891-7133123 Caenorhabditis elegans
Exon238608   138   X: 7133536-7133673 Caenorhabditis elegans
Exon238612   175   X: 7133732-7133906 Caenorhabditis elegans
Exon238616   124   X: 7133949-7134072 Caenorhabditis elegans
Exon238620   118   X: 7134127-7134244 Caenorhabditis elegans
Exon238624   188   X: 7134302-7134489 Caenorhabditis elegans
Exon238628   12   X: 7134541-7134552 Caenorhabditis elegans
Exon238636   222   X: 7135779-7136000 Caenorhabditis elegans
Exon238640   139   X: 7136051-7136189 Caenorhabditis elegans
Exon238644   201   X: 7136240-7136440 Caenorhabditis elegans
Exon238648   245   X: 7136880-7137124 Caenorhabditis elegans
Exon238652   162   X: 7137174-7137335 Caenorhabditis elegans
Exon238656   482   X: 7137385-7137866 Caenorhabditis elegans
Exon238660   145   X: 7138777-7138921 Caenorhabditis elegans
Exon238667   694   X: 7138973-7139666 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54D1.3b.1 7126648 7139666 1

1 Sequence

Length
3681

1 Sequence Ontology Term

Identifier Name Description
transcript