WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F01E11.5c.1 Sequence Name  F01E11.5c.1
Length (nt)  1407   Chromosome Location  X: 6997087-7005347
Chromosome . Primary Identifier  X Chromosome Location . Start  6997087
Chromosome Location . End  7005347 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F01E11.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017157 tyra-2 F01E11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F01E11.5c F01E11.5c 1407   X: 6997087-6997167

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F01E11.5c.1 6997087 7005347 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon238383   81   X: 6997087-6997167 Caenorhabditis elegans
Exon238387   112   X: 6997220-6997331 Caenorhabditis elegans
Exon238391   132   X: 6997379-6997510 Caenorhabditis elegans
Exon238395   191   X: 6997565-6997755 Caenorhabditis elegans
Exon238399   101   X: 6997802-6997902 Caenorhabditis elegans
Exon238403   100   X: 6998846-6998945 Caenorhabditis elegans
Exon238406   18   X: 7000653-7000670 Caenorhabditis elegans
Exon238411   195   X: 7000905-7001099 Caenorhabditis elegans
Exon238414   188   X: 7001146-7001333 Caenorhabditis elegans
Exon238418   121   X: 7001594-7001714 Caenorhabditis elegans
Exon238421   114   X: 7001763-7001876 Caenorhabditis elegans
Exon238424   49   X: 7003131-7003179 Caenorhabditis elegans
Exon238425   5   X: 7005343-7005347 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F01E11.5c.1 6997087 7005347 -1

1 Sequence

Length
1407

1 Sequence Ontology Term

Identifier Name Description
transcript