WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F01E11.5b.1 Sequence Name  F01E11.5b.1
Length (nt)  1399   Chromosome Location  X: 6997087-7001988
Chromosome . Primary Identifier  X Chromosome Location . Start  6997087
Chromosome Location . End  7001988 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F01E11.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017157 tyra-2 F01E11.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F01E11.5b F01E11.5b 1029   X: 6997087-6997167

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F01E11.5b.1 6997087 7001988 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon238382   81   X: 6997087-6997167 Caenorhabditis elegans
Exon238385   112   X: 6997220-6997331 Caenorhabditis elegans
Exon238389   132   X: 6997379-6997510 Caenorhabditis elegans
Exon238393   191   X: 6997565-6997755 Caenorhabditis elegans
Exon238397   101   X: 6997802-6997902 Caenorhabditis elegans
Exon238401   100   X: 6998846-6998945 Caenorhabditis elegans
Exon238404   18   X: 7000653-7000670 Caenorhabditis elegans
Exon238409   195   X: 7000905-7001099 Caenorhabditis elegans
Exon238413   188   X: 7001146-7001333 Caenorhabditis elegans
Exon238416   115   X: 7001594-7001708 Caenorhabditis elegans
Exon238419   115   X: 7001762-7001876 Caenorhabditis elegans
Exon238422   51   X: 7001938-7001988 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F01E11.5b.1 6997087 7001988 -1

1 Sequence

Length
1399

1 Sequence Ontology Term

Identifier Name Description
transcript