WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C53B7.1.1 Sequence Name  C53B7.1.1
Length (nt)  1860   Chromosome Location  X: 6853618-6860922
Chromosome . Primary Identifier  X Chromosome Location . Start  6853618
Chromosome Location . End  6860922 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53B7.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004370 rig-3 C53B7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C53B7.1 C53B7.1 1464   X: 6853644-6853716

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C53B7.1.1 6853618 6860922 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237948   99   X: 6853618-6853716 Caenorhabditis elegans
Exon237950   87   X: 6858312-6858398 Caenorhabditis elegans
Exon237951   112   X: 6858457-6858568 Caenorhabditis elegans
Exon237952   158   X: 6858776-6858933 Caenorhabditis elegans
Exon237953   303   X: 6858990-6859292 Caenorhabditis elegans
Exon237954   303   X: 6859343-6859645 Caenorhabditis elegans
Exon237955   216   X: 6860028-6860243 Caenorhabditis elegans
Exon237956   87   X: 6860295-6860381 Caenorhabditis elegans
Exon237957   495   X: 6860428-6860922 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C53B7.1.1 6853618 6860922 1

1 Sequence

Length
1860

1 Sequence Ontology Term

Identifier Name Description
transcript