WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F38B6.5b.1 Sequence Name  F38B6.5b.1
Length (nt)  1208   Chromosome Location  X: 6672966-6674419
Chromosome . Primary Identifier  X Chromosome Location . Start  6672966
Chromosome Location . End  6674419 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38B6.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000745 col-172 F38B6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38B6.5b F38B6.5b 327   X: 6673874-6673957

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F38B6.5b.1 6672966 6674419 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237452   83   X: 6672966-6673048 Caenorhabditis elegans
Exon237454   111   X: 6673105-6673215 Caenorhabditis elegans
Exon237457   136   X: 6673261-6673396 Caenorhabditis elegans
Exon237461   515   X: 6673443-6673957 Caenorhabditis elegans
Exon237467   363   X: 6674057-6674419 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F38B6.5b.1 6672966 6674419 1

1 Sequence

Length
1208

1 Sequence Ontology Term

Identifier Name Description
transcript