WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F38B6.5a.1 Sequence Name  F38B6.5a.1
Length (nt)  1314   Chromosome Location  X: 6672819-6674423
Chromosome . Primary Identifier  X Chromosome Location . Start  6672819
Chromosome Location . End  6674423 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38B6.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000745 col-172 F38B6.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38B6.5a F38B6.5a 1026   X: 6672983-6673048

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F38B6.5a.1 6672819 6674423 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon237450   230   X: 6672819-6673048 Caenorhabditis elegans
Exon237453   111   X: 6673105-6673215 Caenorhabditis elegans
Exon237456   136   X: 6673261-6673396 Caenorhabditis elegans
Exon237459   120   X: 6673443-6673562 Caenorhabditis elegans
Exon237462   350   X: 6673608-6673957 Caenorhabditis elegans
Exon237468   367   X: 6674057-6674423 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F38B6.5a.1 6672819 6674423 1

1 Sequence

Length
1314

1 Sequence Ontology Term

Identifier Name Description
transcript