WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C15B12.5e.1 Sequence Name  C15B12.5e.1
Length (nt)  2040   Chromosome Location  X: 6479638-6484810
Chromosome . Primary Identifier  X Chromosome Location . Start  6479638
Chromosome Location . End  6484810 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C15B12.5e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001517 gar-1 C15B12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C15B12.5e C15B12.5e 2040   X: 6479638-6479814

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C15B12.5e.1 6479638 6484810 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236832   177   X: 6479638-6479814 Caenorhabditis elegans
Exon236837   58   X: 6479865-6479922 Caenorhabditis elegans
Exon236840   129   X: 6479970-6480098 Caenorhabditis elegans
Exon236846   171   X: 6480246-6480416 Caenorhabditis elegans
Exon236851   137   X: 6480681-6480817 Caenorhabditis elegans
Exon236856   111   X: 6481752-6481862 Caenorhabditis elegans
Exon236861   211   X: 6481907-6482117 Caenorhabditis elegans
Exon236866   150   X: 6482168-6482317 Caenorhabditis elegans
Exon236871   74   X: 6482366-6482439 Caenorhabditis elegans
Exon236879   93   X: 6483095-6483187 Caenorhabditis elegans
Exon236884   96   X: 6483244-6483339 Caenorhabditis elegans
Exon236889   112   X: 6483394-6483505 Caenorhabditis elegans
Exon236894   139   X: 6483553-6483691 Caenorhabditis elegans
Exon236899   117   X: 6483873-6483989 Caenorhabditis elegans
Exon236904   91   X: 6484036-6484126 Caenorhabditis elegans
Exon236909   102   X: 6484239-6484340 Caenorhabditis elegans
Exon236913   72   X: 6484739-6484810 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C15B12.5e.1 6479638 6484810 -1

1 Sequence

Length
2040

1 Sequence Ontology Term

Identifier Name Description
transcript