WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C15B12.5a.1 Sequence Name  C15B12.5a.1
Length (nt)  2244   Chromosome Location  X: 6479443-6484810
Chromosome . Primary Identifier  X Chromosome Location . Start  6479443
Chromosome Location . End  6484810 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C15B12.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001517 gar-1 C15B12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C15B12.5a C15B12.5a 2049   X: 6479638-6479814

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C15B12.5a.1 6479443 6484810 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236828   372   X: 6479443-6479814 Caenorhabditis elegans
Exon236833   58   X: 6479865-6479922 Caenorhabditis elegans
Exon236841   138   X: 6479970-6480107 Caenorhabditis elegans
Exon236843   171   X: 6480246-6480416 Caenorhabditis elegans
Exon236847   137   X: 6480681-6480817 Caenorhabditis elegans
Exon236852   111   X: 6481752-6481862 Caenorhabditis elegans
Exon236857   211   X: 6481907-6482117 Caenorhabditis elegans
Exon236862   150   X: 6482168-6482317 Caenorhabditis elegans
Exon236867   74   X: 6482366-6482439 Caenorhabditis elegans
Exon236875   93   X: 6483095-6483187 Caenorhabditis elegans
Exon236880   96   X: 6483244-6483339 Caenorhabditis elegans
Exon236885   112   X: 6483394-6483505 Caenorhabditis elegans
Exon236890   139   X: 6483553-6483691 Caenorhabditis elegans
Exon236895   117   X: 6483873-6483989 Caenorhabditis elegans
Exon236900   91   X: 6484036-6484126 Caenorhabditis elegans
Exon236905   102   X: 6484239-6484340 Caenorhabditis elegans
Exon236910   72   X: 6484739-6484810 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C15B12.5a.1 6479443 6484810 -1

1 Sequence

Length
2244

1 Sequence Ontology Term

Identifier Name Description
transcript