WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00304907 Gene Name  C03B1.17
Sequence Name  ? C03B1.17 Organism  Caenorhabditis elegans
Automated Description  Is affected by cadmium and fluoranthene based on microarray studies. Biotype  SO:0001217
Genetic Position  X:± Length (nt)  ? 1120
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00304907

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C03B1.17.1 C03B1.17.1 333   X: 6373648-6374767
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C03B1.17 C03B1.17 333   X: 6373648-6373819

1 RNAi Result

WormBase ID
WBRNAi00010036

20 Allele

Public Name
gk964260
gk348269
gk443826
gk443827
gk343811
gk527041
gk422320
gk818995
WBVar00079829
WBVar00079831
WBVar00079830
gk951345
WBVar01980799
WBVar01550230
WBVar01550229
WBVar01550231
WBVar01945543
WBVar01945542
WBVar02086815
WBVar01815744

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00304907 6373648 6374767 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

0 Downstream Intergenic Region

3 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Genes that showed significant differential expressed between control and 20 mg\/L Cadmium treatment. t-test, p < 0.05. WBPaper00036123:Cadmium_regulated
  Genome-wide analysis of developmental and sex-regulated gene expression profile. self-organizing map cgc4489_group_13
  Genes that showed significant differential expressed between control and 1000 mg\/L Fluoranthene treatment. t-test, p < 0.05. WBPaper00036123:Fluoranthene_regulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00304907 6373648 6374767 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
1120

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

1 Upstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_6373384..6373647   264 X: 6373384-6373647 Caenorhabditis elegans