WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T13C5.5.1 Sequence Name  T13C5.5.1
Length (nt)  1085   Chromosome Location  X: 6201875-6204746
Chromosome . Primary Identifier  X Chromosome Location . Start  6201875
Chromosome Location . End  6204746 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T13C5.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000245 bca-1 T13C5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T13C5.5 T13C5.5 813   X: 6202144-6202239

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T13C5.5.1 6201875 6204746 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon236159   365   X: 6201875-6202239 Caenorhabditis elegans
Exon236160   159   X: 6202981-6203139 Caenorhabditis elegans
Exon236161   127   X: 6203190-6203316 Caenorhabditis elegans
Exon236162   104   X: 6203370-6203473 Caenorhabditis elegans
Exon236163   107   X: 6203527-6203633 Caenorhabditis elegans
Exon236164   127   X: 6204476-6204602 Caenorhabditis elegans
Exon236165   96   X: 6204651-6204746 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T13C5.5.1 6201875 6204746 -1

1 Sequence

Length
1085

1 Sequence Ontology Term

Identifier Name Description
transcript