WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09B8.7c.1 Sequence Name  C09B8.7c.1
Length (nt)  1572   Chromosome Location  X: 6044894-6048301
Chromosome . Primary Identifier  X Chromosome Location . Start  6044894
Chromosome Location . End  6048301 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09B8.7c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003911 pak-1 C09B8.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09B8.7c C09B8.7c 1572   X: 6044894-6045052

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C09B8.7c.1 6044894 6048301 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon235584   159   X: 6044894-6045052 Caenorhabditis elegans
Exon235587   72   X: 6045210-6045281 Caenorhabditis elegans
Exon235590   123   X: 6045894-6046016 Caenorhabditis elegans
Exon235593   74   X: 6046071-6046144 Caenorhabditis elegans
Exon235596   568   X: 6046195-6046762 Caenorhabditis elegans
Exon235600   93   X: 6047029-6047121 Caenorhabditis elegans
Exon235602   206   X: 6047166-6047371 Caenorhabditis elegans
Exon235606   148   X: 6047429-6047576 Caenorhabditis elegans
Exon235609   107   X: 6048125-6048231 Caenorhabditis elegans
Exon235610   22   X: 6048280-6048301 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C09B8.7c.1 6044894 6048301 -1

1 Sequence

Length
1572

1 Sequence Ontology Term

Identifier Name Description
transcript