WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C46F4.2a.2 Sequence Name  C46F4.2a.2
Length (nt)  2871   Chromosome Location  X: 5937506-5944510
Chromosome . Primary Identifier  X Chromosome Location . Start  5937506
Chromosome Location . End  5944510 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C46F4.2a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016716 acs-17 C46F4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C46F4.2a C46F4.2a 2157   X: 5937960-5938111

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C46F4.2a.2 5937506 5944510 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon235317   606   X: 5937506-5938111 Caenorhabditis elegans
Exon235322   273   X: 5938402-5938674 Caenorhabditis elegans
Exon235326   770   X: 5938735-5939504 Caenorhabditis elegans
Exon235330   148   X: 5939707-5939854 Caenorhabditis elegans
Exon235336   249   X: 5940105-5940353 Caenorhabditis elegans
Exon235338   85   X: 5940413-5940497 Caenorhabditis elegans
Exon235342   181   X: 5940546-5940726 Caenorhabditis elegans
Exon235346   122   X: 5941627-5941748 Caenorhabditis elegans
Exon235350   93   X: 5941802-5941894 Caenorhabditis elegans
Exon235354   92   X: 5941956-5942047 Caenorhabditis elegans
Exon235358   252   X: 5944259-5944510 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C46F4.2a.2 5937506 5944510 -1

1 Sequence

Length
2871

1 Sequence Ontology Term

Identifier Name Description
transcript