WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49E10.1.1 Sequence Name  F49E10.1.1
Length (nt)  2427   Chromosome Location  X: 5897338-5902157
Chromosome . Primary Identifier  X Chromosome Location . Start  5897338
Chromosome Location . End  5902157 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E10.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018639 tbc-16 F49E10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49E10.1 F49E10.1 2178   X: 5897391-5897448

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F49E10.1.1 5897338 5902157 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon235260   111   X: 5897338-5897448 Caenorhabditis elegans
Exon235261   86   X: 5897523-5897608 Caenorhabditis elegans
Exon235262   122   X: 5897660-5897781 Caenorhabditis elegans
Exon235263   43   X: 5897830-5897872 Caenorhabditis elegans
Exon235264   69   X: 5898242-5898310 Caenorhabditis elegans
Exon235265   93   X: 5898367-5898459 Caenorhabditis elegans
Exon235266   211   X: 5898502-5898712 Caenorhabditis elegans
Exon235267   189   X: 5898757-5898945 Caenorhabditis elegans
Exon235268   89   X: 5898991-5899079 Caenorhabditis elegans
Exon235269   87   X: 5899122-5899208 Caenorhabditis elegans
Exon235270   168   X: 5899258-5899425 Caenorhabditis elegans
Exon235271   281   X: 5900200-5900480 Caenorhabditis elegans
Exon235272   93   X: 5900526-5900618 Caenorhabditis elegans
Exon235273   259   X: 5900672-5900930 Caenorhabditis elegans
Exon235274   168   X: 5901492-5901659 Caenorhabditis elegans
Exon235275   126   X: 5901743-5901868 Caenorhabditis elegans
Exon235276   232   X: 5901926-5902157 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F49E10.1.1 5897338 5902157 1

1 Sequence

Length
2427

1 Sequence Ontology Term

Identifier Name Description
transcript