WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F49E10.5a.1 Sequence Name  F49E10.5a.1
Length (nt)  2834   Chromosome Location  X: 5862708-5873347
Chromosome . Primary Identifier  X Chromosome Location . Start  5862708
Chromosome Location . End  5873347 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E10.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006424 ctbp-1 F49E10.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49E10.5a F49E10.5a 2184   X: 5862757-5862915

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F49E10.5a.1 5862708 5873347 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon235180   208   X: 5862708-5862915 Caenorhabditis elegans
Exon235181   72   X: 5863169-5863240 Caenorhabditis elegans
Exon235182   109   X: 5863294-5863402 Caenorhabditis elegans
Exon235183   78   X: 5864555-5864632 Caenorhabditis elegans
Exon235192   78   X: 5869363-5869440 Caenorhabditis elegans
Exon235194   152   X: 5869500-5869651 Caenorhabditis elegans
Exon235197   145   X: 5870518-5870662 Caenorhabditis elegans
Exon235199   125   X: 5870709-5870833 Caenorhabditis elegans
Exon235201   191   X: 5870880-5871070 Caenorhabditis elegans
Exon235203   251   X: 5871125-5871375 Caenorhabditis elegans
Exon235205   98   X: 5871426-5871523 Caenorhabditis elegans
Exon235207   127   X: 5871966-5872092 Caenorhabditis elegans
Exon235210   1200   X: 5872148-5873347 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F49E10.5a.1 5862708 5873347 1

1 Sequence

Length
2834

1 Sequence Ontology Term

Identifier Name Description
transcript