WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54H2.1a.1 Sequence Name  C54H2.1a.1
Length (nt)  1210   Chromosome Location  X: 5776251-5778878
Chromosome . Primary Identifier  X Chromosome Location . Start  5776251
Chromosome Location . End  5778878 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54H2.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006368 sym-3 C54H2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54H2.1a C54H2.1a 918   X: 5776286-5776333

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54H2.1a.1 5776251 5778878 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234944   83   X: 5776251-5776333 Caenorhabditis elegans
Exon234945   102   X: 5776411-5776512 Caenorhabditis elegans
Exon234949   114   X: 5776960-5777073 Caenorhabditis elegans
Exon234953   197   X: 5777220-5777416 Caenorhabditis elegans
Exon234957   131   X: 5777463-5777593 Caenorhabditis elegans
Exon234959   139   X: 5778091-5778229 Caenorhabditis elegans
Exon234962   444   X: 5778435-5778878 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54H2.1a.1 5776251 5778878 1

1 Sequence

Length
1210

1 Sequence Ontology Term

Identifier Name Description
transcript