WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54H2.1a.2 Sequence Name  C54H2.1a.2
Length (nt)  1303   Chromosome Location  X: 5773771-5778884
Chromosome . Primary Identifier  X Chromosome Location . Start  5773771
Chromosome Location . End  5778884 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54H2.1a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006368 sym-3 C54H2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54H2.1a C54H2.1a 918   X: 5776286-5776333

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54H2.1a.2 5773771 5778884 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234939   87   X: 5773771-5773857 Caenorhabditis elegans
Exon234941   83   X: 5776251-5776333 Caenorhabditis elegans
Exon234946   102   X: 5776411-5776512 Caenorhabditis elegans
Exon234950   114   X: 5776960-5777073 Caenorhabditis elegans
Exon234954   197   X: 5777220-5777416 Caenorhabditis elegans
Exon234958   131   X: 5777463-5777593 Caenorhabditis elegans
Exon234960   139   X: 5778091-5778229 Caenorhabditis elegans
Exon234963   450   X: 5778435-5778884 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54H2.1a.2 5773771 5778884 1

1 Sequence

Length
1303

1 Sequence Ontology Term

Identifier Name Description
transcript