WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54H2.4.1 Sequence Name  C54H2.4.1
Length (nt)  1281   Chromosome Location  X: 5766190-5770748
Chromosome . Primary Identifier  X Chromosome Location . Start  5766190
Chromosome Location . End  5770748 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54H2.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016938 C54H2.4 C54H2.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54H2.4 C54H2.4 924   X: 5766482-5766570

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54H2.4.1 5766190 5770748 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234927   381   X: 5766190-5766570 Caenorhabditis elegans
Exon234928   99   X: 5767237-5767335 Caenorhabditis elegans
Exon234929   52   X: 5767970-5768021 Caenorhabditis elegans
Exon234930   105   X: 5768093-5768197 Caenorhabditis elegans
Exon234931   71   X: 5768276-5768346 Caenorhabditis elegans
Exon234932   79   X: 5768908-5768986 Caenorhabditis elegans
Exon234933   89   X: 5769495-5769583 Caenorhabditis elegans
Exon234934   145   X: 5769633-5769777 Caenorhabditis elegans
Exon234935   56   X: 5769832-5769887 Caenorhabditis elegans
Exon234936   105   X: 5770357-5770461 Caenorhabditis elegans
Exon234937   99   X: 5770650-5770748 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54H2.4.1 5766190 5770748 -1

1 Sequence

Length
1281

1 Sequence Ontology Term

Identifier Name Description
transcript