WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54H2.3.1 Sequence Name  C54H2.3.1
Length (nt)  1879   Chromosome Location  X: 5760281-5763392
Chromosome . Primary Identifier  X Chromosome Location . Start  5760281
Chromosome Location . End  5763392 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54H2.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016937 tag-294 C54H2.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54H2.3 C54H2.3 1293   X: 5760837-5760912

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54H2.3.1 5760281 5763392 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234920   632   X: 5760281-5760912 Caenorhabditis elegans
Exon234921   75   X: 5760966-5761040 Caenorhabditis elegans
Exon234922   873   X: 5761637-5762509 Caenorhabditis elegans
Exon234923   105   X: 5762574-5762678 Caenorhabditis elegans
Exon234924   194   X: 5763199-5763392 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54H2.3.1 5760281 5763392 -1

1 Sequence

Length
1879

1 Sequence Ontology Term

Identifier Name Description
transcript