WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54G7.4.1 Sequence Name  C54G7.4.1
Length (nt)  3897   Chromosome Location  X: 5545587-5552752
Chromosome . Primary Identifier  X Chromosome Location . Start  5545587
Chromosome Location . End  5552752 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54G7.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016935 ifta-1 C54G7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54G7.4 C54G7.4 3741   X: 5545687-5545836

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54G7.4.1 5545587 5552752 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

27 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234203   250   X: 5545587-5545836 Caenorhabditis elegans
Exon234204   100   X: 5545885-5545984 Caenorhabditis elegans
Exon234205   130   X: 5546027-5546156 Caenorhabditis elegans
Exon234206   87   X: 5546200-5546286 Caenorhabditis elegans
Exon234207   136   X: 5546760-5546895 Caenorhabditis elegans
Exon234208   120   X: 5546944-5547063 Caenorhabditis elegans
Exon234209   83   X: 5547114-5547196 Caenorhabditis elegans
Exon234210   199   X: 5547251-5547449 Caenorhabditis elegans
Exon234211   133   X: 5547498-5547630 Caenorhabditis elegans
Exon234212   138   X: 5547760-5547897 Caenorhabditis elegans
Exon234213   491   X: 5548262-5548752 Caenorhabditis elegans
Exon234214   101   X: 5548806-5548906 Caenorhabditis elegans
Exon234215   139   X: 5548990-5549128 Caenorhabditis elegans
Exon234216   57   X: 5549605-5549661 Caenorhabditis elegans
Exon234217   56   X: 5549713-5549768 Caenorhabditis elegans
Exon234218   190   X: 5549816-5550005 Caenorhabditis elegans
Exon234219   105   X: 5550131-5550235 Caenorhabditis elegans
Exon234220   84   X: 5550282-5550365 Caenorhabditis elegans
Exon234221   126   X: 5550409-5550534 Caenorhabditis elegans
Exon234222   146   X: 5550584-5550729 Caenorhabditis elegans
Exon234223   291   X: 5551155-5551445 Caenorhabditis elegans
Exon234224   58   X: 5551492-5551549 Caenorhabditis elegans
Exon234225   81   X: 5551605-5551685 Caenorhabditis elegans
Exon234226   148   X: 5551730-5551877 Caenorhabditis elegans
Exon234227   124   X: 5552205-5552328 Caenorhabditis elegans
Exon234228   190   X: 5552377-5552566 Caenorhabditis elegans
Exon234229   134   X: 5552619-5552752 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54G7.4.1 5545587 5552752 -1

1 Sequence

Length
3897

1 Sequence Ontology Term

Identifier Name Description
transcript