WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54G7.3b.1 Sequence Name  C54G7.3b.1
Length (nt)  4202   Chromosome Location  X: 5528212-5538516
Chromosome . Primary Identifier  X Chromosome Location . Start  5528212
Chromosome Location . End  5538516 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54G7.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002983 lgx-1 C54G7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54G7.3b C54G7.3b 3696   X: 5528663-5529096

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54G7.3b.1 5528212 5538516 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234023   885   X: 5528212-5529096 Caenorhabditis elegans
Exon234025   111   X: 5529270-5529380 Caenorhabditis elegans
Exon234034   308   X: 5529438-5529745 Caenorhabditis elegans
Exon234043   122   X: 5529794-5529915 Caenorhabditis elegans
Exon234052   89   X: 5529961-5530049 Caenorhabditis elegans
Exon234060   453   X: 5530326-5530778 Caenorhabditis elegans
Exon234070   145   X: 5530828-5530972 Caenorhabditis elegans
Exon234079   86   X: 5531025-5531110 Caenorhabditis elegans
Exon234088   81   X: 5531161-5531241 Caenorhabditis elegans
Exon234098   132   X: 5535225-5535356 Caenorhabditis elegans
Exon234107   310   X: 5535410-5535719 Caenorhabditis elegans
Exon234116   107   X: 5535765-5535871 Caenorhabditis elegans
Exon234124   144   X: 5536273-5536416 Caenorhabditis elegans
Exon234130   138   X: 5536499-5536636 Caenorhabditis elegans
Exon234138   153   X: 5536780-5536932 Caenorhabditis elegans
Exon234144   403   X: 5537025-5537427 Caenorhabditis elegans
Exon234153   206   X: 5537471-5537676 Caenorhabditis elegans
Exon234162   116   X: 5537727-5537842 Caenorhabditis elegans
Exon234171   112   X: 5538257-5538368 Caenorhabditis elegans
Exon234187   101   X: 5538416-5538516 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54G7.3b.1 5528212 5538516 -1

1 Sequence

Length
4202

1 Sequence Ontology Term

Identifier Name Description
transcript