WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54G7.3i.1 Sequence Name  C54G7.3i.1
Length (nt)  4818   Chromosome Location  X: 5525342-5538461
Chromosome . Primary Identifier  X Chromosome Location . Start  5525342
Chromosome Location . End  5538461 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54G7.3i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002983 lgx-1 C54G7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54G7.3i C54G7.3i 4818   X: 5525342-5525530

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54G7.3i.1 5525342 5538461 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

30 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233934   189   X: 5525342-5525530 Caenorhabditis elegans
Exon233942   228   X: 5525595-5525822 Caenorhabditis elegans
Exon233950   264   X: 5525965-5526228 Caenorhabditis elegans
Exon233958   154   X: 5526275-5526428 Caenorhabditis elegans
Exon233966   117   X: 5526476-5526592 Caenorhabditis elegans
Exon233974   127   X: 5526872-5526998 Caenorhabditis elegans
Exon233982   138   X: 5527046-5527183 Caenorhabditis elegans
Exon233990   135   X: 5527234-5527368 Caenorhabditis elegans
Exon233998   147   X: 5527425-5527571 Caenorhabditis elegans
Exon234006   267   X: 5527615-5527881 Caenorhabditis elegans
Exon234014   82   X: 5527932-5528013 Caenorhabditis elegans
Exon234022   155   X: 5528059-5528213 Caenorhabditis elegans
Exon234032   111   X: 5529270-5529380 Caenorhabditis elegans
Exon234041   308   X: 5529438-5529745 Caenorhabditis elegans
Exon234050   122   X: 5529794-5529915 Caenorhabditis elegans
Exon234059   89   X: 5529961-5530049 Caenorhabditis elegans
Exon234068   150   X: 5530629-5530778 Caenorhabditis elegans
Exon234077   145   X: 5530828-5530972 Caenorhabditis elegans
Exon234086   86   X: 5531025-5531110 Caenorhabditis elegans
Exon234095   81   X: 5531161-5531241 Caenorhabditis elegans
Exon234105   132   X: 5535225-5535356 Caenorhabditis elegans
Exon234114   310   X: 5535410-5535719 Caenorhabditis elegans
Exon234123   107   X: 5535765-5535871 Caenorhabditis elegans
Exon234137   138   X: 5536499-5536636 Caenorhabditis elegans
Exon234142   153   X: 5536780-5536932 Caenorhabditis elegans
Exon234151   403   X: 5537025-5537427 Caenorhabditis elegans
Exon234160   206   X: 5537471-5537676 Caenorhabditis elegans
Exon234169   116   X: 5537727-5537842 Caenorhabditis elegans
Exon234178   112   X: 5538257-5538368 Caenorhabditis elegans
Exon234185   46   X: 5538416-5538461 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54G7.3i.1 5525342 5538461 -1

1 Sequence

Length
4818

1 Sequence Ontology Term

Identifier Name Description
transcript