WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54G7.3f.1 Sequence Name  C54G7.3f.1
Length (nt)  4968   Chromosome Location  X: 5525342-5538461
Chromosome . Primary Identifier  X Chromosome Location . Start  5525342
Chromosome Location . End  5538461 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54G7.3f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002983 lgx-1 C54G7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54G7.3f C54G7.3f 4968   X: 5525342-5525530

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54G7.3f.1 5525342 5538461 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233931   189   X: 5525342-5525530 Caenorhabditis elegans
Exon233939   228   X: 5525595-5525822 Caenorhabditis elegans
Exon233947   264   X: 5525965-5526228 Caenorhabditis elegans
Exon233955   154   X: 5526275-5526428 Caenorhabditis elegans
Exon233963   117   X: 5526476-5526592 Caenorhabditis elegans
Exon233971   127   X: 5526872-5526998 Caenorhabditis elegans
Exon233979   138   X: 5527046-5527183 Caenorhabditis elegans
Exon233987   135   X: 5527234-5527368 Caenorhabditis elegans
Exon233995   147   X: 5527425-5527571 Caenorhabditis elegans
Exon234003   267   X: 5527615-5527881 Caenorhabditis elegans
Exon234011   82   X: 5527932-5528013 Caenorhabditis elegans
Exon234019   155   X: 5528059-5528213 Caenorhabditis elegans
Exon234029   111   X: 5529270-5529380 Caenorhabditis elegans
Exon234038   308   X: 5529438-5529745 Caenorhabditis elegans
Exon234047   122   X: 5529794-5529915 Caenorhabditis elegans
Exon234056   89   X: 5529961-5530049 Caenorhabditis elegans
Exon234064   453   X: 5530326-5530778 Caenorhabditis elegans
Exon234074   145   X: 5530828-5530972 Caenorhabditis elegans
Exon234083   86   X: 5531025-5531110 Caenorhabditis elegans
Exon234092   81   X: 5531161-5531241 Caenorhabditis elegans
Exon234102   132   X: 5535225-5535356 Caenorhabditis elegans
Exon234111   310   X: 5535410-5535719 Caenorhabditis elegans
Exon234120   107   X: 5535765-5535871 Caenorhabditis elegans
Exon234134   138   X: 5536499-5536636 Caenorhabditis elegans
Exon234148   403   X: 5537025-5537427 Caenorhabditis elegans
Exon234157   206   X: 5537471-5537676 Caenorhabditis elegans
Exon234166   116   X: 5537727-5537842 Caenorhabditis elegans
Exon234175   112   X: 5538257-5538368 Caenorhabditis elegans
Exon234182   46   X: 5538416-5538461 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54G7.3f.1 5525342 5538461 -1

1 Sequence

Length
4968

1 Sequence Ontology Term

Identifier Name Description
transcript