WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54G7.3c.1 Sequence Name  C54G7.3c.1
Length (nt)  5265   Chromosome Location  X: 5525342-5538461
Chromosome . Primary Identifier  X Chromosome Location . Start  5525342
Chromosome Location . End  5538461 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54G7.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002983 lgx-1 C54G7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54G7.3c C54G7.3c 5265   X: 5525342-5525530

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54G7.3c.1 5525342 5538461 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

31 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233928   189   X: 5525342-5525530 Caenorhabditis elegans
Exon233936   228   X: 5525595-5525822 Caenorhabditis elegans
Exon233944   264   X: 5525965-5526228 Caenorhabditis elegans
Exon233952   154   X: 5526275-5526428 Caenorhabditis elegans
Exon233960   117   X: 5526476-5526592 Caenorhabditis elegans
Exon233968   127   X: 5526872-5526998 Caenorhabditis elegans
Exon233976   138   X: 5527046-5527183 Caenorhabditis elegans
Exon233984   135   X: 5527234-5527368 Caenorhabditis elegans
Exon233992   147   X: 5527425-5527571 Caenorhabditis elegans
Exon234000   267   X: 5527615-5527881 Caenorhabditis elegans
Exon234008   82   X: 5527932-5528013 Caenorhabditis elegans
Exon234016   155   X: 5528059-5528213 Caenorhabditis elegans
Exon234026   111   X: 5529270-5529380 Caenorhabditis elegans
Exon234035   308   X: 5529438-5529745 Caenorhabditis elegans
Exon234044   122   X: 5529794-5529915 Caenorhabditis elegans
Exon234053   89   X: 5529961-5530049 Caenorhabditis elegans
Exon234061   453   X: 5530326-5530778 Caenorhabditis elegans
Exon234071   145   X: 5530828-5530972 Caenorhabditis elegans
Exon234080   86   X: 5531025-5531110 Caenorhabditis elegans
Exon234089   81   X: 5531161-5531241 Caenorhabditis elegans
Exon234099   132   X: 5535225-5535356 Caenorhabditis elegans
Exon234108   310   X: 5535410-5535719 Caenorhabditis elegans
Exon234117   107   X: 5535765-5535871 Caenorhabditis elegans
Exon234125   144   X: 5536273-5536416 Caenorhabditis elegans
Exon234131   138   X: 5536499-5536636 Caenorhabditis elegans
Exon234139   153   X: 5536780-5536932 Caenorhabditis elegans
Exon234145   403   X: 5537025-5537427 Caenorhabditis elegans
Exon234154   206   X: 5537471-5537676 Caenorhabditis elegans
Exon234163   116   X: 5537727-5537842 Caenorhabditis elegans
Exon234172   112   X: 5538257-5538368 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54G7.3c.1 5525342 5538461 -1

1 Sequence

Length
5265

1 Sequence Ontology Term

Identifier Name Description
transcript