WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C54G7.3a.1 Sequence Name  C54G7.3a.1
Length (nt)  4937   Chromosome Location  X: 5525123-5538514
Chromosome . Primary Identifier  X Chromosome Location . Start  5525123
Chromosome Location . End  5538514 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54G7.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002983 lgx-1 C54G7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C54G7.3a C54G7.3a 4665   X: 5525342-5525530

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C54G7.3a.1 5525123 5538514 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233926   408   X: 5525123-5525530 Caenorhabditis elegans
Exon233935   228   X: 5525595-5525822 Caenorhabditis elegans
Exon233943   264   X: 5525965-5526228 Caenorhabditis elegans
Exon233951   154   X: 5526275-5526428 Caenorhabditis elegans
Exon233959   117   X: 5526476-5526592 Caenorhabditis elegans
Exon233967   127   X: 5526872-5526998 Caenorhabditis elegans
Exon233975   138   X: 5527046-5527183 Caenorhabditis elegans
Exon233983   135   X: 5527234-5527368 Caenorhabditis elegans
Exon233991   147   X: 5527425-5527571 Caenorhabditis elegans
Exon233999   267   X: 5527615-5527881 Caenorhabditis elegans
Exon234007   82   X: 5527932-5528013 Caenorhabditis elegans
Exon234015   155   X: 5528059-5528213 Caenorhabditis elegans
Exon234024   111   X: 5529270-5529380 Caenorhabditis elegans
Exon234033   308   X: 5529438-5529745 Caenorhabditis elegans
Exon234042   122   X: 5529794-5529915 Caenorhabditis elegans
Exon234051   89   X: 5529961-5530049 Caenorhabditis elegans
Exon234065   150   X: 5530629-5530778 Caenorhabditis elegans
Exon234069   145   X: 5530828-5530972 Caenorhabditis elegans
Exon234078   86   X: 5531025-5531110 Caenorhabditis elegans
Exon234087   81   X: 5531161-5531241 Caenorhabditis elegans
Exon234097   132   X: 5535225-5535356 Caenorhabditis elegans
Exon234106   310   X: 5535410-5535719 Caenorhabditis elegans
Exon234115   107   X: 5535765-5535871 Caenorhabditis elegans
Exon234129   138   X: 5536499-5536636 Caenorhabditis elegans
Exon234143   403   X: 5537025-5537427 Caenorhabditis elegans
Exon234152   206   X: 5537471-5537676 Caenorhabditis elegans
Exon234161   116   X: 5537727-5537842 Caenorhabditis elegans
Exon234170   112   X: 5538257-5538368 Caenorhabditis elegans
Exon234186   99   X: 5538416-5538514 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C54G7.3a.1 5525123 5538514 -1

1 Sequence

Length
4937

1 Sequence Ontology Term

Identifier Name Description
transcript