WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25F6.4.1 Sequence Name  C25F6.4.1
Length (nt)  3049   Chromosome Location  X: 5461230-5466785
Chromosome . Primary Identifier  X Chromosome Location . Start  5461230
Chromosome Location . End  5466785 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25F6.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016104 ddr-1 C25F6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25F6.4 C25F6.4 2301   X: 5461256-5461319

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C25F6.4.1 5461230 5466785 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233795   90   X: 5461230-5461319 Caenorhabditis elegans
Exon233796   185   X: 5461384-5461568 Caenorhabditis elegans
Exon233797   153   X: 5461616-5461768 Caenorhabditis elegans
Exon233798   148   X: 5462277-5462424 Caenorhabditis elegans
Exon233799   109   X: 5462476-5462584 Caenorhabditis elegans
Exon233800   101   X: 5462743-5462843 Caenorhabditis elegans
Exon233801   106   X: 5462888-5462993 Caenorhabditis elegans
Exon233802   78   X: 5463293-5463370 Caenorhabditis elegans
Exon233803   107   X: 5463420-5463526 Caenorhabditis elegans
Exon233804   167   X: 5463574-5463740 Caenorhabditis elegans
Exon233805   314   X: 5464098-5464411 Caenorhabditis elegans
Exon233806   300   X: 5464461-5464760 Caenorhabditis elegans
Exon233807   196   X: 5465486-5465681 Caenorhabditis elegans
Exon233808   150   X: 5465737-5465886 Caenorhabditis elegans
Exon233809   845   X: 5465941-5466785 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C25F6.4.1 5461230 5466785 1

1 Sequence

Length
3049

1 Sequence Ontology Term

Identifier Name Description
transcript