WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C41A3.2a.2 Sequence Name  C41A3.2a.2
Length (nt)  2600   Chromosome Location  X: 5406539-5414350
Chromosome . Primary Identifier  X Chromosome Location . Start  5406539
Chromosome Location . End  5414350 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C41A3.2a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016559 C41A3.2 C41A3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C41A3.2a C41A3.2a 2337   X: 5406718-5407041

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C41A3.2a.2 5406539 5414350 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233653   503   X: 5406539-5407041 Caenorhabditis elegans
Exon233656   56   X: 5407094-5407149 Caenorhabditis elegans
Exon233658   78   X: 5407194-5407271 Caenorhabditis elegans
Exon233661   246   X: 5407579-5407824 Caenorhabditis elegans
Exon233663   72   X: 5407867-5407938 Caenorhabditis elegans
Exon233666   266   X: 5407984-5408249 Caenorhabditis elegans
Exon233668   231   X: 5408313-5408543 Caenorhabditis elegans
Exon233671   183   X: 5408789-5408971 Caenorhabditis elegans
Exon233674   94   X: 5409027-5409120 Caenorhabditis elegans
Exon233677   263   X: 5409171-5409433 Caenorhabditis elegans
Exon233680   94   X: 5409917-5410010 Caenorhabditis elegans
Exon233683   83   X: 5410060-5410142 Caenorhabditis elegans
Exon233686   131   X: 5410192-5410322 Caenorhabditis elegans
Exon233689   89   X: 5410369-5410457 Caenorhabditis elegans
Exon233692   154   X: 5411597-5411750 Caenorhabditis elegans
Exon233698   57   X: 5414294-5414350 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C41A3.2a.2 5406539 5414350 -1

1 Sequence

Length
2600

1 Sequence Ontology Term

Identifier Name Description
transcript