WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35C8.3.2 Sequence Name  F35C8.3.2
Length (nt)  2488   Chromosome Location  X: 5368468-5373958
Chromosome . Primary Identifier  X Chromosome Location . Start  5368468
Chromosome Location . End  5373958 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35C8.3.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002177 jkk-1 F35C8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35C8.3 F35C8.3 1308   X: 5368665-5368698

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F35C8.3.2 5368468 5373958 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233530   231   X: 5368468-5368698 Caenorhabditis elegans
Exon233534   108   X: 5369355-5369462 Caenorhabditis elegans
Exon233536   81   X: 5369613-5369693 Caenorhabditis elegans
Exon233538   111   X: 5369741-5369851 Caenorhabditis elegans
Exon233540   113   X: 5369900-5370012 Caenorhabditis elegans
Exon233542   117   X: 5370431-5370547 Caenorhabditis elegans
Exon233544   156   X: 5370594-5370749 Caenorhabditis elegans
Exon233546   165   X: 5370809-5370973 Caenorhabditis elegans
Exon233548   162   X: 5371245-5371406 Caenorhabditis elegans
Exon233550   93   X: 5371449-5371541 Caenorhabditis elegans
Exon233552   60   X: 5371590-5371649 Caenorhabditis elegans
Exon233553   264   X: 5371703-5371966 Caenorhabditis elegans
Exon233562   57   X: 5373005-5373061 Caenorhabditis elegans
Exon233564   628   X: 5373109-5373736 Caenorhabditis elegans
Exon233567   142   X: 5373817-5373958 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F35C8.3.2 5368468 5373958 1

1 Sequence

Length
2488

1 Sequence Ontology Term

Identifier Name Description
transcript