WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y34B4A.8a.1 Sequence Name  Y34B4A.8a.1
Length (nt)  2492   Chromosome Location  X: 5271785-5278677
Chromosome . Primary Identifier  X Chromosome Location . Start  5271785
Chromosome Location . End  5278677 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y34B4A.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021324 rga-8 Y34B4A.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y34B4A.8a Y34B4A.8a 1815   X: 5272322-5272325

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y34B4A.8a.1 5271785 5278677 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233036   541   X: 5271785-5272325 Caenorhabditis elegans
Exon233041   275   X: 5272398-5272672 Caenorhabditis elegans
Exon233051   241   X: 5272947-5273187 Caenorhabditis elegans
Exon233061   147   X: 5273238-5273384 Caenorhabditis elegans
Exon233071   129   X: 5273441-5273569 Caenorhabditis elegans
Exon233081   125   X: 5273619-5273743 Caenorhabditis elegans
Exon233091   203   X: 5273796-5273998 Caenorhabditis elegans
Exon233101   94   X: 5274259-5274352 Caenorhabditis elegans
Exon233111   155   X: 5274414-5274568 Caenorhabditis elegans
Exon233121   247   X: 5274616-5274862 Caenorhabditis elegans
Exon233131   87   X: 5274910-5274996 Caenorhabditis elegans
Exon233141   61   X: 5275066-5275126 Caenorhabditis elegans
Exon233151   52   X: 5275236-5275287 Caenorhabditis elegans
Exon233168   60   X: 5276516-5276575 Caenorhabditis elegans
Exon233177   75   X: 5278603-5278677 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y34B4A.8a.1 5271785 5278677 -1

1 Sequence

Length
2492

1 Sequence Ontology Term

Identifier Name Description
transcript